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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7460395 chr8:11835375 C/T SGK223 chr8:8175258-8244008:- -0.39 -7.28 1.41E-12 Box Plot
THCA rs7460436 chr8:10254322 C/T SGK223 chr8:8175258-8244008:- -0.34 -6.28 7.68E-10 Box Plot
THCA rs7460507 chr8:10969075 C/T SGK223 chr8:8175258-8244008:- 0.45 8.5 2.45E-16 Box Plot
THCA rs7461062 chr8:11831948 T/C SGK223 chr8:8175258-8244008:- -0.4 -7.49 3.26E-13 Box Plot
THCA rs7461065 chr8:10790202 G/T SGK223 chr8:8175258-8244008:- 0.32 6.08 2.52E-9 Box Plot
THCA rs7461177 chr8:10789982 C/T SGK223 chr8:8175258-8244008:- 0.33 6.29 7.05E-10 Box Plot
THCA rs7461180 chr8:10790019 C/T SGK223 chr8:8175258-8244008:- 0.33 6.29 7.05E-10 Box Plot
THCA rs7461237 chr8:10790204 C/T SGK223 chr8:8175258-8244008:- 0.32 6.08 2.52E-9 Box Plot
THCA rs7461273 chr8:11777977 C/G SGK223 chr8:8175258-8244008:- -0.45 -8.33 8.92E-16 Box Plot
THCA rs7462931 chr8:10910343 G/C SGK223 chr8:8175258-8244008:- 0.46 9.04 3.94E-18 Box Plot
THCA rs74634552 chr9:69039133 G/A FAM95B1 chr9:42466317-42474239:+ 0.36 6.15 1.66E-9 Box Plot
THCA rs74635827 chr2:132210878 T/C CCDC74B chr2:130896860-130902707:- 0.37 6.66 7.68E-11 Box Plot
THCA rs7464218 chr8:11782496 T/C SGK223 chr8:8175258-8244008:- -0.45 -8.6 1.11E-16 Box Plot
THCA rs74645534 chr8:3309530 G/T CSMD1 chr8:2792875-4852494:- -0.43 -8.08 5.2E-15 Box Plot
THCA rs74648963 chr6:54595693 A/C USP45 chr6:99880255-99969604:- 0.35 5.9 6.97E-9 Box Plot